Diagnostic Accuracy and Clinical Utility of InaTB-Rif, Locally Developed Molecular Test for Tuberculosis, in Comparison with Xpert MTB/RIF in Indonesia
DOI:
https://doi.org/10.36497/jri.v45i2.907Keywords:
Ina-TB/RIF, molecular diagnostic test, rifampicin resistance, tuberculosis diagnosis, Xpert MTB/RIFAbstract
Background: Tuberculosis (TB) remains a significant public health issue in Indonesia. Early and accurate diagnosis and drug susceptibility testing are essential for TB management. This study compared the diagnostic accuracy of the locally developed InaTB-Rif molecular test and Xpert MTB/RIF, using Mycobacterium Growth Indicator Tube (MGIT) culture as the reference standard.
Methods: A cross-sectional study was conducted at Persahabatan Hospital, Jakarta, from February to August 2023. Presumptive pulmonary TB patients were recruited and tested using Xpert MTB/RIF, InaTB-Rif, and MGIT culture. The study assessed the sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and agreement between InaTB-Rif and Xpert MTB/RIF for Mycobacterium tuberculosis (MTB) detection and rifampicin resistance. Diagnostic accuracy was compared using receiver operating characteristic (ROC) curves.
Results: MGIT culture identified 29 TB-positive and 26 TB-negative cases. InaTB-RIF showed a sensitivity of 93.1% (95% CI=0.77-0.99), specificity of 76.9% (95% CI=0.56-0.91), PPV of 81.8% (95% CI=0.64-0.93), and NPV of 90.9% (95% CI=0.70-0.98). Xpert MTB/RIF had a sensitivity of 89.7% (95% CI=0.726-0.978), specificity of 80.8% (95% CI=0.606-0.93), PPV of 83.9% (95% CI=0.66-0.94), and NPV of 87.5% (95% CI=0.67-0.97). The area under the curve (AUC) was 0.8501 for InaTB-RIF and 0.8521 for Xpert MTB/RIF, with no significant difference in accuracy (P=0.965). The kappa value for MTB detection was 0.776, indicating substantial agreement, while the kappa value for rifampicin resistance detection was 0.517, indicating moderate agreement.
Conclusions: InaTB-RIF demonstrates comparable diagnostic accuracy to Xpert MTB/RIF with good diagnostic performance and agreement for detecting MTB and moderate agreement for rifampicin resistance detection.
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References
1. World Health Organization. Global tuberculosis report 2023 [Internet]. [cited 2024 Aug 13]. Available from: https://www.who.int/teams/global-programme-on-tuberculosis-and-lung-health/tb-reports/global-tuberculosis-report-2023
2. Uplekar M, Weil D, Lonnroth K, Jaramillo E, Lienhardt C, Dias HM, et al. WHO’s new end TB strategy. Lancet. 2015;385:1799–801.
3. World Health Organization. Global tuberculosis report 2024 [Internet]. [cited 2024 Aug 13]. Available from: https://www.who.int/teams/global-programme-on-tuberculosis-and-lung-health/tb-reports/global-tuberculosis-report-2024
4. World Health Organization. WHO standard : Universal access to rapid tuberculosis diagnostics. Geneva; 2023.
5. Wu Z, Rueda ZV, Li T, Zhang Z, Jiang Y, Sha W, et al. Effect of the Xpert MTB/RIF on the detection of pulmonary tuberculosis cases and rifampicin resistance in Shanghai, China. BMC Infect Dis. 2020;20.
6. Ershova J V., Volchenkov G V., Somova TR, Kuznetsova TA, Kaunetis N V., Kaminski D, et al. Impact of GeneXpert MTB/RIF® on treatment initiation and outcomes of RIF-resistant and RIF-susceptible TB patients in Vladimir TB dispensary, Russia. BMC Infect Dis. 2020;20:543.
7. Acharya B, Acharya A, Gautam S, Ghimire SP, Mishra G, Parajuli N, et al. Advances in diagnosis of tuberculosis: an update into molecular diagnosis of Mycobacterium tuberculosis. Mol Biol Rep. 2020;47:4065–75.
8. Pinto LM, Udwadia ZF. Xpert MTB/RIF and pulmonary tuberculosis: time to delve deeper? Thorax. 2013;68:987.
9. Cazabon D, Pande T, Kik S, Van Gemert W, Sohn H, Denkinger C, et al. Market penetration of Xpert MTB/RIF in high tuberculosis burden countries: a trend analysis from 2014-2016. Gates Open Res. 2018;2:35.
10. Agredo F, Osorio L. Coverage and fidelity of the Xpert MTB/RIFTM implementation in a high-burden area for pulmonary tuberculosis in Colombia. Biomedica. 2020;40:626–40.
11. Nalugwa T, Shete PB, Nantale M, Farr K, Ojok C, Ochom E, et al. Challenges with scale-up of GeneXpert MTB/RIF® in Uganda: a health systems perspective. BMC Health Serv Res. 2020;20:162.
12. Directorate General of Prevention and Disease Control. Tuberculosis control in Indonesia 2022. Indonesia; 2022.
13. Phyu MH, Kyaw KWY, Myint Z, Thida A, Satyanarayana S, Aung ST. Sputum smear-positive, Xpert ® MTB/RIF-negative results: magnitude and treatment outcomes of patients in Myanmar. Public Health Action. 2019;8:181–6.
14. Zetola NM, Shin SS, Tumedi KA, Moeti K, Ncube R, Nicol M, et al. Mixed Mycobacterium tuberculosis complex infections and false-negative results for rifampin resistance by genexpert MTB/RIF are associated with poor clinical outcomes. J Clin Microbiol. 2014;52:2422–9.
15. Ngangue YR, Mbuli C, Neh A, Nshom E, Koudjou A, Palmer D, et al. Diagnostic accuracy of the truenat MTB plus assay and comparison with the Xpert MTB/RIF assay to detect tuberculosis among hospital outpatients in Cameroon. J Clin Microbiol. 2022;60:e0015522.
16. Burhan E, Karyana M, Karuniawati A, Kusmiati T, Wibisono BH, Handayani D, et al. Characteristics of drug-sensitive and drug-resistant tuberculosis cases among adults at tuberculosis referral hospitals in Indonesia. Am J Trop Med Hyg. 2022;107:984–91.
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